Services
theRing provides the following services:
Contacts
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Data Sources
Data included in theRING come from a variety of heterogeneous sources. Data sources may have been used for regulatory interactions and/or ontologies for naming convention and standardisaztion.
| DB Name | sub DBs | Type | # sub DBs | Link |
|---|---|---|---|---|
| TcoF DB | BioGRID, IntAct, Reactome and MINT | co-TF | 1 | Link |
| TargetMine | AMADEUS, OregAnno and HTRIdb | TF | 1 | Link |
| tf2dna | tf2dna inferred, PScan-Jolma2013, Pscan-Mathelier2014, Pscan-Matys2006, Pscan-Scharer2009, Pscan-Weirauch2014, Pscan-Gerstein2012, Pscan-Berger2006, Pscan-Kulakovskiy2013, Pscan-Chen2011 | TF | 10 | Link |
| TRRUST | -- | TF | 1 | Link |
| KEGG | -- | GRN | 1 | Link |
| Reactome | -- | PPI | 1 | Link |
| Signor | -- | PPI | 1 | Link |
| MINT | Mentha, IntAct, DIP, MPact, PPID and BioGRID | PPI | 6 | Link |
| iRefIndex | BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI | PPI | 12 | Link |
| FisinGene | Reactome, Panther, CellMap, NCI Pathway Interaction DB, KEGG, IntAct, BioGRID, HPRD | PPI | 8 | Link |
| miRTarBase | -- | miRNA-Target | 1 | Link |
| miRWalk | -- | miRNA-Target | 1 | Link |
| TargetScan | -- | miRNA-Target | 1 | Link |
| miRIAD | -- | miRNA-Host | 1 | Link |
| DisGeNET | -- | gene-disease and variant-disease associations (GDA, VDA) | 1 | Link |
| Open Targets | -- | gene-disease associations (GDA) | 1 | Link |
| PharmGKB | -- | gene-disease and gene-drug associations (GDA, GDD) | 1 | Link |
| DGIdb | -- | gene-drug associations (GDD) | 1 | Link |
| DrugBank | -- | drug-target association (DTA) | 1 | Link |
| Stitch | -- | drug-target association (DTA) | 1 | Link |
| NCBI Gene | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| Uniprot | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| miRBase | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| UCSC MySQL | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| Gene Ontology | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| ChEMBL | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| OMIM | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| STRING | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| UniChem | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
| dbSNP | -- | Knowledge Base, Ontology and X-ref | 1 | Link |
Aknowledgement
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